LOCUS 26_35-B3-9-10 3832 bp ds-DNA circular SYN 16-JAN-2026
DEFINITION pAgroGate-AarI-OH9-A-BsaI-ccdB-CbR-BsaI-G-OH10-AarI.
ACCESSION
VERSION .
KEYWORDS amilCP_Orange chromoprotein.
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Liljeruhm J, Funk SK, Tietscher S, Edlund AD, Jamal S,
Wistrand-Yuen P, Dyrhage K, Gynna A, Ivermark K, Lovgren J,
Tornblom V, Virtanen A, Lundin ER, Wistrand-Yuen E and Forster AC
TITLE Engineering a palette of eukaryotic chromoproteins for bacterial
synthetic biology.
JOURNAL J Biol Eng. 2018 May 10;12:8. doi: 10.1186/s13036-018-0100-0.
eCollection 2018.
PUBMED 29760772
REFERENCE 2 (bases 1 to 2800)
AUTHORS .
TITLE Direct Submission
JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58
http://www.snapgene.com
COMMENT ##Collection_Info-START##
PSB ID :: 26_35
##Collection_Info-END##
FEATURES Location/Qualifiers
primer complement(42..62)
/created_by="jonas"
/label="end"
terminator 184..278
/note="transcription terminator from phage lambda"
/label="lambda t0 terminator"
misc_feature complement(299..958)
/Transferred_From="cmR"
/Transferred_Similarity="99.85%"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="14 CmR"
/Transferred_Similarity="99.85%"
/Primary_Match="99.85%; Adjusted-Interval-0:0/0; CmR (14 CmR)"
/Alternative_Match="99.85%; Adjusted-Interval-0:0/0; CmR"
/label="CmR"
/note="Geneious type: Bacterial Selection"
terminator 1162..1205
/note="putative bacterial transcription terminator"
/label="bacterial terminator"
GG 1207..1221
/created_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="OH1"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; OH1"
/modified_by="mamee"
/label="OH9"
GG complement(1222..1232)
/created_by="thjac"
/modified_by="thjac"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="A"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; A"
/label="A"
CDS complement(1239..1544)
/Transferred_From="ccdB"
/Transferred_Similarity="99.02%"
/label="ccdB"
UTR complement(1545..1863)
/Mismatches=1
/%_Identity="99.68652037617555"
/Motif="AAGCCAGATAACAGTATGCGTATTTGCGCGCTGATTTTTGCGGTATAAGA
ATATATACTGATATGTATACCCGAAGTATGTCAAAAGGAGGTATGCTATGAAGCAGCG
TATTACAGTGACAGTTGACAGCGACAGCTATCAGTTGCTCAAGGCATATATGATGTCA
ATATCTCCGGTCTGGTAAGCACAACCATGCAGAATGAAGCCCGTCGTCTGCGTGCCGA
ACGCTGGAAAGCGGAAAATCAGGAAGGGATGGCTGAGGTCGCCCGGTTTATTGAAATG
AACGGCTCTTTTGCTGACGAGAACAGGGGCTGGTGAA"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="ccdB"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; ccdB
5'UTR (ccdB)"
/Alternative_Match="100.00%; Adjusted-Interval-0:0/0; ccdB
5'UTR (13 ccdB)"
/label="ccdB 5'UTR"
misc_feature complement(1882..2742)
/X-Transferred_From="AmpR"
/X-Transferred_Similarity="100.00%"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="AmpR"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; AmpR"
/label="AmpR"
/note="Geneious type: Bacterial Selection"
promoter complement(2743..2847)
/created_by="mamee"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="AmpR"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; amp (AmpR)"
/label="amp"
GG 2887..2897
/%_Identity=100
/Motif="GGTCTCAGTAT"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="G"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; G"
/label="G"
GG complement(2898..2912)
/created_by="mamee"
/modified_by="mamee"
/label="OH10"
terminator 2993..3050
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
/label="his operon terminator"
rep_origin complement(3245..1)
/created_by="thjac"
/modified_by="mamee"
/note="Derived using Geneious Prime 2025.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="pUC ori"
/Transferred_Similarity="99.83%"
/Primary_Match="99.83%; Adjusted-Interval-0:0/0; pUC ori"
/Alternative_Match="99.66%; Adjusted-Interval-0:0/0; pColE1 ori"
/label="pUC ori"
ORIGIN
1 agaagatcct ttgatctttt ctacggggtc tgacgctcag tggaacgaaa actcacgtta
61 agggattttg gtcatgagat tatcaaaaag gatcttcacc tagatccttt taaattaaaa
121 atgaagtttt aaatcaatct aaagtatata tgagtaaact tggtctgaca gctcgaggct
181 tggattctca ccaataaaaa acgcccggcg gcaaccgagc gttctgaaca aatccagatg
241 gagttctgag gtcattactg gatctatcaa caggagtcca agcgagctcg atatcaaatt
301 acgccccgcc ctgccactca tcgcagtact gttgtaattc attaagcatt ctgccgacat
361 ggaagccatc acaaacggca tgatgaacct gaatcgccag cggcatcagc accttgtcgc
421 cttgcgtata atatttgccc atggtgaaaa cgggggcgaa gaagttgtcc atattggcca
481 cgtttaaatc aaaactggtg aaactcaccc agggattggc tgagacgaaa aacatattct
541 caataaaccc tttagggaaa taggccaggt tttcaccgta acacgccaca tcttgcgaat
601 atatgtgtag aaactgccgg aaatcgtcgt ggtattcact ccagagcgat gaaaacgttt
661 cagtttgctc atggaaaacg gtgtaacaag ggtgaacact atcccatatc accagctcac
721 cgtctttcat tgccatacga aattccggat gagcattcat caggcgggca agaatgtgaa
781 taaaggccgg ataaaacttg tgcttatttt tctttacggt ctttaaaaag gccgtaatat
841 ccagctgaac ggtctggtta taggtacatt gagcaactga ctgaaatgcc tcaaaatgtt
901 ctttacgatg ccattgggat atatcaacgg tggtatatcc agtgattttt ttctccattt
961 tagcttcctt agctcctgaa aatctcgata actcaaaaaa tacgcccggt agtgatctta
1021 tttcattatg gtgaaagttg gaacctctta cgtgcccgat caactcgagt gccacctgac
1081 gtctaagaaa ccattattat catgacatta acccaggctt tacactttat gcttccggca
1141 ataggcgtat cacgaggcag aatttcagat aaaaaaaatc cttagctttc gctaaggatg
1201 atttcgcacc tgcataggtc aaccttgaga ccgtcgactt atattcccca gaacatcagg
1261 ttaatggcgt ttttgatgtc attttcgcgg tggctgagat cagccacttc ttccccgata
1321 acggaaaccg gcacactggc catatcggtg gtcatcatgc gccagctttc atccccgata
1381 tgcaccaccg ggtaaagttc acgggagact ttatctgaca gcagacgtgc actggccagg
1441 gggatcacca tccgtcgccc gggcgtgtca ataatatcac tctgtacatc cacaaacaga
1501 cgataacggc tctctctttt ataggtgtaa accttaaact gcatttcacc agcccctgtt
1561 ctcgtcagca aaagagccgt tcatttcaat aaaccgggcg acctcagcca tcccttcctg
1621 attttccgct ttccagcgtt cggcacgcag acgacgggct tcattctgca tggttgtgct
1681 taccagaccg gagatattga catcatatat gccttgagca actgatagct gtcgctgtca
1741 actgtcactg taatacgctg cttcatagca tacctctttt tgacatactt cgggtataca
1801 tatcagtata tattcttata ccgcaaaaat cagcgcgcaa atacgcatac tgttatctgg
1861 cttttagtaa gccggatcca cttaccaatg cttaatcagt gaggcaccta tctcagcgat
1921 ctgtctattt cgttcatcca tagttgcctg actccccgtc gtgtagataa ctacgatacg
1981 ggagggctta ccatctggcc ccagtgctgc aatgatacct cgagagccac gctcaccggc
2041 tccagattta tcagcaataa accagccagc cggaagggcc gagcgcagaa gtggtcctgc
2101 aactttatcc gcctccatcc agtctattaa ttgttgccgg gaagctagag taagtagttc
2161 gccagttaat agtttgcgca acgttgttgc cattgctaca ggcatcgtgg tgtcacgctc
2221 gtcgtttggt atggcttcat tcagctccgg ttcccaacga tcaaggcgag ttacatgatc
2281 ccccatgttg tgcaaaaaag cggttagctc cttcggtcct ccgatcgttg tcagaagtaa
2341 gttggccgca gtgttatcac tcatggttat ggcagcactg cataattctc ttactgtcat
2401 gccatccgta agatgctttt ctgtgactgg tgagtactca accaagtcat tctgagaata
2461 gtgtatgcgg cgaccgagtt gctcttgccc ggcgtcaata cgggataata ccgcgccaca
2521 tagcagaact ttaaaagtgc tcatcattgg aaaacgttct tcggggcgaa aactctcaag
2581 gatcttaccg ctgttgagat ccagttcgat gtaacccact cgtgcaccca actgatcttc
2641 agcatctttt actttcacca gcgtttctgg gtgagcaaaa acaggaaggc aaaatgccgc
2701 aaaaaaggga ataagggcga cacggaaatg ttgaatactc atactcttcc tttttcaata
2761 ttattgaagc atttatcagg gttattgtct catgagcgga tacatatttg aatgtattta
2821 gaaaaataaa caaatagggg ttccgcgcac atttccccga aaagtgccac ctgacgtcta
2881 agaaacggtc tcagtatgga atcgagcagg tggaattctc gccatctagc gagtcgtaat
2941 acctggccgt actgatacga acgttttaca acgtcgtgac tgggaaaacc cttccggcaa
3001 aaaagggcaa ggtgtcacca ccctgccctt tttctttaaa accgaaaaga ttacttcgcg
3061 ttatgcaggc ttcctcgctc actgactcgc tgcgctcggt cgttcggctg cggcgagcgg
3121 tatcagctca ctcaaaggcg gtaatacggt tatccacaga atcaggggat aacgcaggaa
3181 agaacatgtg agcaaaaggc cagcaaaagg ccaggaaccg taaaaaggcc gcgttgctgg
3241 cgtttttcca caggctccgc ccccctgacg agcatcacaa aaatcgacgc tcaagtcaga
3301 ggtggcgaaa cccgacagga ctataaagat accaggcgtt tccccctgga agctccctcg
3361 tgcgctctcc tgttccgacc ctgccgctta ccggatacct gtccgccttt ctcccttcgg
3421 gaagcgtggc gctttctcat agctcacgct gtaggtatct cagttcggtg taggtcgttc
3481 gctccaagct gggctgtgtg cacgaacccc ccgttcagcc cgaccgctgc gccttatccg
3541 gtaactatcg tcttgagtcc aacccggtaa gacacgactt atcgccactg gcagcagcca
3601 ctggtaacag gattagcaga gcgaggtatg taggcggtgc tacagagttc ttgaagtggt
3661 ggcctaacta cggctacact agaagaacag tatttggtat ctgcgctctg ctgaagccag
3721 ttaccttcgg aaaaagagtt ggtagctctt gatccggcaa acaaaccacc gctggtagcg
3781 gtggtttttt tgtttgcaag cagcagatta cgcgcagaaa aaaaggatct ca
//