LOCUS pGGIB-U4-pZmPLTP-ZmBBM-tnos-U5 4941 bp DNA circular UNA 23-FEB-2023
DEFINITION .
ACCESSION urn.local...8e-aruiqnr
VERSION urn.local...8e-aruiqnr
KEYWORDS .
SOURCE .
ORGANISM .
FEATURES Location/Qualifiers
misc_difference 1..18
/created_by="laurenspauwels"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="I-SceI site"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; I-SceI
site"
/label="I-SceI site"
misc_feature 19..58
/created_by="lapau"
/modified_by="wacae"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="U3"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; U3"
/label="U3"
/note="Geneious type: Golden Gibson Cloning site"
promoter 71..1381
/created_by="lapau"
/modified_by="lapau"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="pZmAXIG"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; pZmAXIG"
/label="pZmAXIG"
CDS 1386..2294
/created_by="lapau"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="ZmWUS2"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; ZmWUS2"
/label="ZmWUS2"
terminator 2299..2538
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="35ST"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; 35ST"
/label="35ST"
misc_feature 2549..2588
/created_by="lapau"
/modified_by="wacae"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="U4"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; U4"
/label="U4"
/note="Geneious type: Golden Gibson Cloning site"
misc_difference complement(2589..2606)
/created_by="laurenspauwels"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="I-SceI site"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; I-SceI
site"
/label="I-SceI site"
primer complement(2634..2654)
/note="Derived using Geneious Prime 2022.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="pCDB-Cas9 - GWM13R"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; GWM13R
(pCDB-Cas9 - GWM13R)"
/label="GWM13R"
promoter 2715..2765
/created_by="chgai"
/X-Transferred_From="pCG034_pKan_Kan-CBE"
/X-Transferred_Similarity="100.00%"
/X-Primary_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG034_pKan_Kan-CBE)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG040_ABE-Nuc-NLS_Kan
-reporter_control)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG043_Kan-ABE-Dest_co
ntrol_ccdB)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG046_ABE-LbCas12a-NL
S_Kan_control)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG005_pGGD-pKan-KanR-
E)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG006_pGGA-Kan_promot
er-B)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG035_pKan_Kan)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG039_ABE-N7-NLS_Kan-
reporter_control)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG041_ABE-SV40-NLS_Ka
n-reporter_control)"
/X-Alternative_Match="100.00%; Adjusted-Interval-0:0/0;
Kan_promoter (pCG054_Kan_CBE_control
)"
/modified_by="mamee"
/note="Derived using Geneious Prime 2022.1.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="KanR"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; kan (KanR)"
/label="kan"
misc_feature 2766..3575
/modified_by="wacae"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="KanR"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; KanR"
/label="KanR"
/note="Geneious type: Bacterial Selection"
rep_origin 3722..4310
/created_by="thjac"
/modified_by="thjac"
/note="Derived using Geneious Prime 2020.2.4 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="high-copy-number ColE1/pMB1/pBR322/pUC
origin of replication"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0;
ColE1/pMB1/pBR322/pUC Ori (high-copy-number
ColE1/pMB1/pBR322/pUC origin of replication)"
/label="ColE1/pMB1/pBR322/pUC Ori"
primer 4910..4930
/note="Derived using Geneious Prime 2022.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="pCDB-Cas9 - GWM13F"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; GWM13F
(pCDB-Cas9 - GWM13F)"
/label="GWM13F"
ORIGIN
1 attaccctgt tatccctagc actgaaggtc ctcaatcgca ctggaaacat caaggtcgct
61 cgagatacct aggcgaccca tcgctgcttt gtctacatca tgttcttcat catcctcccc
121 aggcgacgcg tgctgctgtt cttattcaga ctaccgttcg agtgactgca tggcgtacat
181 ctttctgcat cgactttgta cggctacatc gaacatatac acgagatgtc tcgtgtgaat
241 agagtcacta atgccttaag catcggttac tccgtagggt acattctgtt cttcttattt
301 gtgcatattt ttattgttgt ttactgatta tacgagtagt tatacataca tgcacataca
361 tatcatcaca tatatcacaa tatttttcta aattaaatta aaactaaaaa tgactaaatt
421 tctaacacca acgacattgt aatgttttct ccaacaactt tacctattct acattgttct
481 atttcgaatt tcactctata aacaacatag tctacaatgg aaaacagtgc tttgtacgac
541 tatatacgcg atgtgtggct acaacataag acaatatagt cgtttgaaga ttgaacctat
601 atatcggtac ggttaatccg tctatgtacg tgggcatgac gaacacccgt gataacgaag
661 gattaacgtg cacaatcata aatccaaagt aggagcggtg catgatgaga atcgctctca
721 gtactcgaca taatgaacct tacgaggtac aacaggcagg caggcaggga ccaggggccg
781 cctttatttc aggctcgctg gccccacggg cgtgctgcgt gcacgaaggg cactacccca
841 acctctcacc gaaaaccgcg ctggatcggc aaatcaaacg aggtggtgcc ccgtgcccac
901 tctccacgtc cacggcacca tccctctgca gccgctcacc agccatgccg tgtcgcggaa
961 cggcacaacc acccccaacc cactcacgaa accccgtccc ggccgtgccc gtgtcggtcc
1021 gcgctcggca acgaggcggc ccgcgctgct gagtcccctg gacacccgac accctgtcgg
1081 ccctttgttt attcatcccg aaatctcatc tgcccccacg gccgactgcg ctgcgccgcc
1141 cggatatata tacccatcgt tatcgatcga tcgatcgcgt cactcacggg tagctcatgg
1201 tcgagcgtag catgcaggaa cttatttgcc gtgcgctccc agctctccgc tcgcgtgcct
1261 tccagtctgt ctcacactag ctgctgtggg acgatcgaag tgggtgtgtc agctagctag
1321 ctgcgccgtg accacgcaca tgaccgcagt gcgcgcgggg ctgatcaagg gaaagtgatc
1381 cggctatggc ggccaatgcg ggcggcggtg gagcgggagg aggcagcggc agcggcagcg
1441 tggctgcgcc ggcggtgtgc cgccccagcg gctcgcggtg gacgccgacg ccggagcaga
1501 tcaggatgct gaaggagctc tactacggct gcggcatccg gtcgcccagc tcggagcaga
1561 tccagcgcat caccgccatg ctgcggcagc acggcaagat cgagggcaag aacgtcttct
1621 actggttcca gaaccacaag gcccgcgagc gccagaagcg ccgcctcacc agcctcgacg
1681 tcaacgtgcc cgccgccggc gcggccgacg ccaccaccag ccaactcggc gtcctctcgc
1741 tgtcgtcgcc gccgccttca ggcgcggcgc ctccctcgcc caccctcggc ttctacgccg
1801 ccggcaatgg cggcggatcg gctgtgctgc tggacacgag ttccgactgg ggcagcagcg
1861 gcgctgccat ggccaccgag acatgcttcc tgcaggacta catgggcgtg acggacacgg
1921 gcagctcgtc gcagtggcca cgcttctcgt cgtcggacac gataatggcg gcggccgcgg
1981 cgcgggcggc gacgacgcgg gcgcccgaga cgctccctct cttcccgacc tgcggcgacg
2041 acggcggcag cggtagcagc agctacttgc cgttctgggg tgccgcgtcc acaactgccg
2101 gcgccacttc ttccgttgcg atccagcagc aacaccagct gcaggagcag tacagctttt
2161 acagcaacag caacagcacc cagctggccg gcaccggcaa ccaagacgta tcggcaacag
2221 cagcagcagc cgccgccctg gagctgagcc tcagctcatg gtgctcccct taccctgctg
2281 cagggagtat gtgatcagga taactagctg agcggccatg ctagagtccg caaaaatcac
2341 cagtctctct ctacaaatct atctctctct atttttctcc agaataatgt gtgagtagtt
2401 cccagataag ggaattaggg ttcttatagg gtttcgctca tgtgttgagc atataagaaa
2461 cccttagtat gtatttgtat ttgtaaaata cttctatcaa taaaatttct aattcctaaa
2521 accaaaatcc agtgacctgt attctagact gacctcctgc cagcaatagt aagacaacac
2581 gcaaagtcta gggataacag ggtaatgata tcccctatag tgagtcgtat tacatggtca
2641 tagctgtttc ctggcagctc tggcccgtgt ctcaaaatct ctgatgttac attgcacaag
2701 ataaaaatat atcatcatga acaataaaac tgtctgctta cataaacagt aatacaaggg
2761 gtgttatgag ccatattcaa cgggaaacgt cgaggccgcg attaaattcc aacatggatg
2821 ctgatttata tgggtataaa tgggctcgcg ataatgtcgg gcaatcaggt gcgacaatct
2881 atcgcttgta tgggaagccc gatgcgccag agttgtttct gaaacatggc aaaggtagcg
2941 ttgccaatga tgttacagat gagatggtca gactaaactg gctgacggaa tttatgcctc
3001 ttccgaccat caagcatttt atccgtactc ctgatgatgc atggttactc accactgcga
3061 tccccggaaa aacagcattc caggtattag aagaatatcc tgattcaggt gaaaatattg
3121 ttgatgcgct ggcagtgttc ctgcgccggt tgcattcgat tcctgtttgt aattgtcctt
3181 ttaacagcga tcgcgtattt cgtctcgctc aggcgcaatc acgaatgaat aacggtttgg
3241 ttgatgcgag tgattttgat gacgagcgta atggctggcc tgttgaacaa gtctggaaag
3301 aaatgcataa acttttgcca ttctcaccgg attcagtcgt cactcatggt gatttctcac
3361 ttgataacct tatttttgac gaggggaaat taataggttg tattgatgtt ggacgagtcg
3421 gaatcgcaga ccgataccag gatcttgcca tcctatggaa ctgcctcggt gagttttctc
3481 cttcattaca gaaacggctt tttcaaaaat atggtattga taatcctgat atgaataaat
3541 tgcagtttca tttgatgctc gatgagtttt tctaatcaga attggttaat tggttgtaac
3601 actggcagag cattacgctg acttgacggg acggcgcaag ctcatgacca aaatccctta
3661 acgtgagtta cgcgtcgttc cactgagcgt cagaccccgt agaaaagatc aaaggatctt
3721 cttgagatcc tttttttctg cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac
3781 cagcggtggt ttgtttgccg gatcaagagc taccaactct ttttccgaag gtaactggct
3841 tcagcagagc gcagatacca aatactgttc ttctagtgta gccgtagtta ggccaccact
3901 tcaagaactc tgtagcaccg cctacatacc tcgctctgct aatcctgtta ccagtggctg
3961 ctgccagtgg cgataagtcg tgtcttaccg ggttggactc aagacgatag ttaccggata
4021 aggcgcagcg gtcgggctga acggggggtt cgtgcacaca gcccagcttg gagcgaacga
4081 cctacaccga actgagatac ctacagcgtg agctatgaga aagcgccacg cttcccgaag
4141 ggagaaaggc ggacaggtat ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg
4201 agcttccagg gggaaacgcc tggtatcttt atagtcctgt cgggtttcgc cacctctgac
4261 ttgagcgtcg atttttgtga tgctcgtcag gggggcggag cctatggaaa aacgccagca
4321 acgcggcctt tttacggttc ctggcctttt gctggccttt tgctcacatg ttctttcctg
4381 cgttatcccc tgattctgtg gataaccgta ttaccgcctt tgagtgagct gataccgctc
4441 gccgcagccg aacgaccgag cgcagcgagt cagtgagcga ggaagcggaa gagcgcccaa
4501 tacgcaaacc gcctctcccc gcgcgttggc cgattcatta atgcagctgg cacgacaggt
4561 ttcccgactg gaaagcgggc agtgagcgca acgcaattaa tacgcgtacc gctagccagg
4621 aagagtttgt agaaacgcaa aaaggccatc cgtcaggatg gccttctgct tagtttgatg
4681 cctggcagtt tatggcgggc gtcctgcccg ccaccccttc gggccgttgc ttcacaacgt
4741 tcaaatccgc tcccggcgga tttgtcctac tcaggagagc gttcaccgac aaacaacaga
4801 taaaacgaaa ggcccagtca tccgactgag cctttcgttt tatttgatgc ctggcagttc
4861 cctactctcg cgttaacgct agcatggatg ttttcccagt cacgacgttg taaaacgacg
4921 gccagtctta agctcgggcc c
//