LOCUS pGG-C-LoxP-ZmNLS-mScarlet-D 3206 bp DNA circular UNA 21-APR-2023
DEFINITION .
ACCESSION
VERSION .
KEYWORDS .
SOURCE .
ORGANISM .
FEATURES Location/Qualifiers
GG 1..11
/modified_by="wacae"
/note="Derived using Geneious Prime 2022.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="C"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; C"
/label="C"
Start 14..16
/created_by="lapau"
/modified_by="mamee"
/label="START"
motif 17..50
/created_by="lapau"
/note="Derived using Geneious Prime 2022.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="loxP"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; loxP"
/label="LoxP"
NLS 53..142
/created_by="lapau"
/modified_by="mamee"
/label="O2 NLS"
CDS 143..841
/vntifkey=4
/note="Derived using Geneious Prime 2022.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="mScarlet"
/Transferred_Similarity="99.86%"
/Adjusted_Transferred_Similarity="99.43%"
/Primary_Match="99.86%; Adjusted-Interval-0:0/-3
(adjustedto 99.43%; Adjusted-Interval-0:0/0); mScarlet-L
(mScarlet)"
/Alternative_Match="89.97%; Adjusted-Interval-0:0/-3
(adjusted to 89.59%; Adjusted-Interval-0:0/0); mCherry"
/Alternative_Match="67.24%; Adjusted-Interval-0:3/-3
(adjusted to 66.67%; Adjusted-Interval-0:0/0); TagRFP"
/Alternative_Match="63.43%; Adjusted-Interval-0:0/-3
(adjusted to 63.17%; Adjusted-Interval-0:0/0); mRuby3"
/modified_by="mamee"
/label="mScarlet-L*"
GG complement(842..852)
/created_by="thjac"
/modified_by="thjac"
/note="Derived using Geneious Prime 2022.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="D"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; D"
/Alternative_Match="90.91%; Adjusted-Interval-0:0/0; E"
/label="D"
rep_origin complement(1083..1671)
/created_by="thjac"
/modified_by="thjac"
/note="Derived using Geneious Prime 2022.2.2 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="high-copy-number ColE1/pMB1/pBR322/pUC
origin of replication"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0;
ColE1/pMB1/pBR322/pUC Ori (high-copy-number
ColE1/pMB1/pBR322/pUC origin of replication)"
/label="ColE1/pMB1/pBR322/pUC Ori"
misc_feature complement(1842..2702)
/X-Transferred_From="AmpR"
/X-Transferred_Similarity="100.00%"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="AmpR"
/Transferred_Similarity="99.42%"
/Primary_Match="99.42%; Adjusted-Interval-0:0/0; AmpR"
/label="AmpR"
/note="Geneious type: Bacterial Selection"
promoter complement(2703..2807)
/created_by="mamee"
/modified_by="mamee"
/note="Derived using Geneious Prime 2023.0.1 'Annotate
from Database' based on nucleotide similarity"
/Transferred_From="AmpR"
/Transferred_Similarity="100.00%"
/Primary_Match="100.00%; Adjusted-Interval-0:0/0; amp (AmpR)"
/label="amp"
ORIGIN
1 ggtctcaggc tccatgataa cttcgtatag catacattat acgaagttat cccctaccga
61 ggaaagagtg aggaaaagaa aggaatccaa tagagaatca gccagacgct cgagatacag
121 gaaagccgct cacctgaaag aactggtgag caagggcgag gcagtgatca aggagttcat
181 gcggttcaag gtgcacatgg agggctccat gaacggccac gagttcgaga tcgagggcga
241 gggcgagggc cgcccctacg agggcaccca gaccgccaag ctgaaggtga ccaagggtgg
301 ccccctgccc ttctcctggg acatcctgtc ccctcagttc atgtacggct ccagggcctt
361 caccaagcac cccgccgaca tccccgacta ctataagcag tccttccccg agggcttcaa
421 gtgggagcgc gtgatgaact tcgaggacgg cggcgccgtg accgtgaccc aggacacctc
481 cctggaggac ggcaccctga tctacaaggt gaagctccgc ggcaccaact tccctcctga
541 cggccccgta atgcagaaga agacaatggg ctgggaagcg tccaccgagc ggttgtaccc
601 cgaggacggc gtgctgaagg gcgacattaa gatggccctg cgcctgaagg acggcggccg
661 ctacctggcg gacttcaaga ccacctacaa ggccaagaag cccgtgcaga tgcccggcgc
721 ctacaacgtc gaccgcaagt tggacatcac ctcccacaac gaggactaca ccgtggtgga
781 acagtacgaa cgctccgagg gccgccactc caccggcggc atggacgagc tgtacaagtg
841 atcagtgaga ccgatatcct gggcctcatg ggccttccgc tcactgcccg ctttccagtc
901 gggaaacctg tcgtgccagc tgcattaaca tggtcatagc tgtttccttg cgtattgggc
961 gctctccgct tcctcgctca ctgactcgct gcgctcggtc gttcgggtaa agcctggggt
1021 gcctaatgag caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg
1081 tttttccata ggctccgccc ccctgacgag catcacaaaa atcgacgctc aagtcagagg
1141 tggcgaaacc cgacaggact ataaagatac caggcgtttc cccctggaag ctccctcgtg
1201 cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga
1261 agcgtggcgc tttctcatag ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc
1321 tccaagctgg gctgtgtgca cgaacccccc gttcagcccg accgctgcgc cttatccggt
1381 aactatcgtc ttgagtccaa cccggtaaga cacgacttat cgccactggc agcagccact
1441 ggtaacagga ttagcagagc gaggtatgta ggcggtgcta cagagttctt gaagtggtgg
1501 cctaactacg gctacactag aagaacagta tttggtatct gcgctctgct gaagccagtt
1561 accttcggaa aaagagttgg tagctcttga tccggcaaac aaaccaccgc tggtagcggt
1621 ggtttttttg tttgcaagca gcagattacg cgcagaaaaa aaggatctca agaagatcct
1681 ttgatctttt ctacggggtc tgacgctcag tggaacgaaa actcacgtta agggattttg
1741 gtcatgagat tatcaaaaag gatcttcacc tagatccttt taaattaaaa atgaagtttt
1801 aaatcaatct aaagtatata tgagtaaact tggtctgaca gttaccaatg cttaatcagt
1861 gaggcaccta tctcagcgat ctgtctattt cgttcatcca tagttgcctg actccccgtc
1921 gtgtagataa ctacgatacg ggagggctta ccatctggcc ccagtgctgc aatgataccg
1981 cgagaaccac gctcaccggc tccagattta tcagcaataa accagccagc cggaagggcc
2041 gagcgcagaa gtggtcctgc aactttatcc gcctccatcc agtctattaa ttgttgccgg
2101 gaagctagag taagtagttc gccagttaat agtttgcgca atgttgttgc cattgctacg
2161 ggcatcgtgg tgtcacgctc gtcgtttggt atggcttcat tcagctccgg ttcccaacga
2221 tcaaggcgag ttacatgatc ccccatgttg tgcaaaaaag cggttagctc cttcggtcct
2281 ccgatcgttg tcagaagtaa gttggccgca gtgttatcgc tcatggttat ggcagcactg
2341 cataattctc ttactgtcat gccatccgta agatgctttt ctgtgactgg tgagtactca
2401 accaagtcat tctgagaata gtgtatgcgg cgaccgagtt gctcttgccc ggcgtcaata
2461 cgggataata ccgcgccaca tagcagaact ttaaaagtgc tcatcattgg aaaacgttct
2521 tcggggcgaa aactctcaag gatcttaccg ctgttgagat ccagttcgat gtaacccact
2581 cgtgcaccca actgatcttc agcatctttt actttcacca gcgtttctgg gtgagcaaaa
2641 acaggaaggc aaaatgccgc aaaaaaggga ataagggcga cacggaaatg ttgaatactc
2701 atactcttcc tttttcaata ttattgaagc atttatcagg gttattgtct catgagcgga
2761 tacatatttg aatgtattta gaaaaataaa caaatagggg ttccgcgcac atttccccga
2821 aaagtgccac ctaaattgta agcgttaata ttttgttaaa attcgcgtta aatttttgtt
2881 aaatcagctc attttttaac caataggccg aaatcggcaa aatcccttat aaatcaaaaa
2941 gaatagaccg agatagggtt gagtggccgc tacagggcgc tcccattcgc cattcaggct
3001 gcgcaactgt tgggaagggc gtttcggtgc gggcctcttc gctattacgc cagctggcga
3061 aagggggatg tgctgcaagg cgattaagtt gggtaacgcc agggttttcc cagtcacgac
3121 gttgtaaaac gacggccagt gagcgcgacg taatacgact cactataggg cgaattggcg
3181 gaaggccgtc aaggccgcat gatatc
//